Allen Institute for Neural Dynamics
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aind-ephys-pipeline
aind-ephys-pipeline PublicAIND pipeline for processing extracellular electrophysiology data
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aind-data-schema
aind-data-schema PublicA library that defines AIND data schema and validates JSON.
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openscope-community-predictive-processing
openscope-community-predictive-processing PublicThis repository serves as a hub for community-driven contributions, documentation, and project tracking of the OpenScope Predictive Processing Community project.
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aind-ephys-spikesort-kilosort25-full
aind-ephys-spikesort-kilosort25-full PublicCodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.
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supervoxel-loss
supervoxel-loss PublicEfficient connectivity-preserving loss function for training neural networks to perform instance segmentation.
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ComputationalReviewTemplate
ComputationalReviewTemplate Public templateA repository to start computational reviews with AI
Repositories
- slap2-F0-network Public
Blind-spot network that estimates the baseline (F0) and noise of SLAP2 glutamate movies, trained on GIAnT residuals
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- aind-dynamic-foraging-bfm-studies Public
Scientific studies of the dynamic-foraging-bfm stack: one folder per question, with launch records, frozen inputs, analysis and reports. Extracted with full history from aind-dynamic-foraging-bfm-dispatcher.
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- aind-dynamic-foraging-bfm-wrapper Public
Job wrapper for Dynamic Foraging Behavior Foundation Model project
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